URL: https://cse.buffalo.edu/~mgao8/
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<title>Mingchen Gao, University at Buffalo SUNY</title>
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<p><span class="STYLE40 STYLE4">Mingchen Gao</span> (<span class="STYLE43">高明辰</span>) </p>
<p><span class="STYLE44"><code><br />
<a href="https://engineering.buffalo.edu/computer-science-engineering.html">Department of Computer Science and Engineering</a><br />
<a href="https://www.buffalo.edu/">University at Buffalo, SUNY</a>
</code></span></p>
<p><span class="STYLE44"><code>347 Davis Hall, Buffalo, NY, 14260<br>Phone: (716)-645-2834<br>
Email: mgao8 at buffalo dot edu<br>
</code></span><br>
</p>
<!-- <p><strong><font color="#FF0000"><strike> I am looking for motivated Ph.D. students who are interested in medical imaging informatics, computer vision and machine learning. Please send me your CV and/or apply to CSE Buffalo and indicate me as your potential advisor if you are interested.</font></strong></strike> Temporarily no position is available. Please check later.</p> -->
<p><font color="#FF0000">I am looking for motivated Ph.D. students interested in medical imaging informatics, computer vision, and machine learning. Please send me your CV and/or apply to CSE Buffalo and indicate me as your potential advisor if you are interested. </p>
<p align="left"> <a href="files/MingchenGao_CV.pdf"><u>[CV]</u></a> <a href="https://scholar.google.com/citations?user=1KUHms8AAAAJ&hl=en">[Google Scholar]</a> <a href="https://www.linkedin.com/in/mingchen-gao-39759227">[LinkedIn]</a></p> </td>
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<p class="STYLE42"><strong>Short Bio: </strong></p>
<p>Currently I am an Assistant Professor in the Department of Computer Science and Engineering of University at Buffalo. </p>
<p> I spent three years as a Postdoctoral Fellow in <a href="http://www.cc.nih.gov/drd/">Department of Radiology and Imaging Science</a> of the Clinical Center at National Institutes of Health.
</p>
<p class="STYLE41">I received PhD in Computer Science from Rutgers University in 2014, under supervision of <a href="http://www.cs.rutgers.edu/%7Ednm/">Prof. Dimitris N. Metaxas</a>. I received my B.S. degree from Chien-shiung Wu College (Gifted Young Class), Southeast University, Nanjing, China in 2007.</p>
<p class="STYLE41"><strong>Research Interests: </strong> </p>
<ul>
<li class="STYLE41">Medical Imaging Informatics</li>
<li class="STYLE41">Computer Vision </li>
<li class="STYLE41">Machine Learning </li>
</ul>
<p class="STYLE41"><strong>Current PhD Students: </strong> </p>
<ul>
<li class="STYLE41">Yan Shen (01/2018 - present)</li>
<li class="STYLE41">Chunwei Ma (08/2018 - present)</li>
<li class="STYLE41">Zhanghexuan Ji (08/2018 - present) </li>
<li class="STYLE41">Zhenyi Wang (08/2021 - present) </li>
</ul>
<p class="STYLE41"><strong>Teaching: </strong></p>
<ul>
<li class="STYLE41">Spring 2020, Spring 2021, Spring 2022, Spring 2024: CSE674 Advanced Machine Learning [<a href="files/teaching/2022Spring_CSE674_syllabus.pdf">syllabus</a>]</li>
<li class="STYLE41">Fall 2017, Fall 2018, Fall 2019, Fall 2020, Spring 2022, Fall 2023: CSE703/CSE712 Deep Learning for Visual Recognition with Applications to Medical Imaging Analysis [<a href="files/teaching/2022Spring_CSE712_syllabus.pdf">syllabus</a>]</li>
<li class="STYLE41">Spring 2018, Spring 2019, Fall 2020, Fall 2021, Fall 2022, Fall 2023: CSE4/574 Introduction to Machine Learning [<a href="files/teaching/2021Fall_ML_syllabus.pdf">syllabus</a>]</li>
</ul>
<p class="STYLE41"><strong>Research Projects: </strong></p>
<ul>
<li class="STYLE41"> <strong><font color="#FF0000">[NEW!] </font></strong> CAREER: Deploying Transferable Medical Imaging Diagnosis System in Diverse Environments, NSF IIS-2239537, 2023-2028 </li>
<li class="STYLE41">Novel Geometric Algorithms for Learning from Big Biomedical Data, NSF, IIS-1910492, (PI: Jinhui Xu), 2019-2022 </li>
<li class="STYLE41">AI Drug Discovery to Characterise and Treat Every Disease, AI Germination Space Program, UB, (PI: Ram Samudrala), 2018-2019 </li>
</ul>
<p><strong>Selected Publications:</strong></p>
<ul>
<li><strong><font color="#FF0000">[NEW!]</font></strong> <span class="STYLE1">Defending against Data-Free Model Extraction by Distributionally Robust Defensive Training </span>
[<a href="files/">PDF</a>]<br>
Zhenyi Wang, Li Shen, Tongliang Liu, Tiehang Duan, Yanjun Zhu, Donglin Zhan, David Doermann, and <u>Mingchen Gao</u><br>
<strong>NeurIPS'23</strong>, In Thirty-seventh Conference on Neural Information Processing Systems (NeurIPS), 2023.<br><br></li>
<li><strong><font color="#FF0000">[NEW!]</font></strong> <span class="STYLE1">Distributionally Robust Memory Evolution With Generalized Divergence for Continual Learning </span>
[<a href="files/">PDF</a>]<br>
Zhenyi Wang, Li Shen, Tiehang Duan, Qiuiling Suo, Le Fang, Wei Liu and <u>Mingchen Gao</u><br>
<strong>PAMI'23</strong>, In IEEE Transactions on Pattern Analysis and Machine Intelligence (PAMI), 2023<br><br></li>
<li><strong><font color="#FF0000">[NEW!]</font></strong> <span class="STYLE1">FedMM: A Communication Efficient Solver for Federated Adversarial Domain Adaptation </span>
[<a href="files/">PDF</a>]<br>
Yan Shen, Jian Du, Han Zhao, Zhanghexuan Ji, Chunwei Ma and <u>Mingchen Gao</u><br>
<strong>AAMAS'23</strong>, In Proceedings of the 2023 International Conference on Autonomous Agents and Multiagent Systems (AAMAS), 2023<br><br></li>
<li><strong><font color="#FF0000">[NEW!]</font></strong> <span class="STYLE1">Continual segment: Towards a single, unified and non-forgetting continual segmentation model of 143 whole-body organs in CT scans </span>
[<a href="files/">PDF</a>]<br>
Zhanghexuan Ji, Dazhou Guo, Puyang Wang, Ke Yan, Le Lu, Minfeng Xu, Qifeng Wang, Jia Ge, <u>Mingchen Gao</u>, Xianghua Ye, Dakai Jin <br>
<strong>ICCV'23</strong>, In Proceedings of the IEEE/CVF International Conference on Computer Vision (ICCV), 2023<br><br></li>
<li><strong><font color="#FF0000">[NEW!]</font></strong> <span class="STYLE1">MetaMix: Towards Corruption-Robust Continual Learning With Temporally Self-Adaptive Data Transformation</span>
[<a href="files/">PDF</a>]<br>
Zhenyi Wang, Li Shen, Donglin Zhan, Qiuling Suo, Yanjun Zhu, Tiehang Duan, and <u>Mingchen Gao</u><br>
<strong>CVPR'23</strong>, In Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition (CVPR), 2023.<br><br></li>
<li><span class="STYLE1">Meta-learning with less forgetting on large-scale non-stationary task distributions</span>
[<a href="files/">PDF</a>]<br>
Zhenyi Wang, Li Shen, Le Fang, Qiuling Suo, Donglin Zhan, Tiehang Duan, and <u>Mingchen Gao</u><br>
<strong>ECCV'22</strong>, In Proceedings of European Conference on Computer Vision (ECCV), 2022.<br><br></li>
<li><span class="STYLE1">Progressive Voronoi Diagram Subdivision Enables Accurate Data-free Class-Incremental Learning </span>
[<a href="files/">PDF</a>]<br>
Chunwei Ma, Zhanghexuan Ji, Ziyun Huang, Yan Shen, <u>Mingchen Gao</u>, and Jinhui Xu .<br>
<strong>ICLR'22</strong>, In International Conference on Learning Representations (ICLR), 2022.<br><br></li>
<li><span class="STYLE1">Few-Shot Learning Geometric Ensemble for Multi-label Classification of Chest X-Rays </span>
[<a href="files/">PDF</a>]<br>
Dana Moukheiber, Saurabh Mahindre, Lama Moukheiber, Mira Moukheiber, Song Wang, Chunwei Ma, George Shih, Yifan Peng, and <u>Mingchen Gao</u>, <br>
<strong>DALI'22</strong>, In MICCAI Workshop on Data Augmentation, Labelling, and Imperfections, 2022.<br><br></li>
<li><span class="STYLE1">Improving task-free continual learning by distributionally robust memory evolution. </span>
[<a href="files/">PDF</a>]<br>
Zhenyi Wang, Li Shen, Le Fang, Qiuling Suo, Tiehang Duan, and <u>Mingchen Gao</u>.<br>
<strong>ICML'22</strong>, In International Conference on Machine Learning (ICML), 2022.<br><br></li>
<li><span class="STYLE1">Meta-learning without data via Wasserstein distributionally-robust model fusion. </span>
[<a href="files/">PDF</a>]<br>
Zhenyi Wang, Xiaoyang Wang, Li Shen, Qiuling Suo, Kaiqiang Song, Dong Yu, Yan Shen, and <u>Mingchen Gao</u>.<br>
<strong>UAI'22</strong>, In Uncertainty in Artificial Intelligence (UAI), 2022.<br><br></li>
<li> <span class="STYLE1">Learning to learn and remember er sup er long multi-domain task sequence. </span>
[<a href="files/">PDF</a>]<br>
Zhenyi Wang, Li Shen, Tiehang Duan, Donglin Zhan, Le Fang, and <u>Mingchen Gao</u>.<br>
<strong>CVPR'22</strong>, In IEEE/CVF Conference on Computer Vision and pattern Recognition (CVPR), 2022.<br>
<span class="STYLE59 STYLE2" style="font-weight: bold;">Oral Presentation</span><br><br></li>
<li><span class="STYLE1">Identifying protein features and pathways responsible for toxicity using machine learning and Tox21: Implications for predictive toxicology. </span>
[<a href="files/">PDF</a>]<br>
Lama Moukheiber, William Mangione, Mira Moukheiber, Saeed Maleki, Zackary Falls, <u>Mingchen Gao</u>, and Ram Samudrala <br>
<strong>Molecules'22</strong>, In Molecules, 27(9):3021, 2022.<br><br></li>
<li> <span class="STYLE1">Meta learning on a sequence of imbalanced domains with difficulty awareness. </span>
[<a href="files/">PDF</a>]<br>
Zhenyi Wang, Tiehang Duan, Le Fang, Qiuling Suo, and <u>Mingchen Gao</u>.<br>
<strong>ICCV'21</strong>, In International Conference on Computer Vision, 2021.<br><br></li>
<li> <span class="STYLE1">Few-shot learning via dirichlet tessellation ensemble. </span>
[<a href="files/">PDF</a>]<br>
Chunwei Ma, Ziyun Huang, <u>Mingchen Gao</u>, and Jinhui Xu .<br>
<strong>ICLR'21</strong>, In International Conference on Learning Representations (ICLR), 2021.<br><br></li>
<li><span class="STYLE1">Improving uncertainty calibration of deep neural networks via truth discovery and geometric optimization. </span>
[<a href="files/">PDF</a>]<br>
Chunwei Ma, Ziyun Huang, Jiayi Xian, <u>Mingchen Gao</u>, and Jinhui Xu.<br>
<strong>UAI'21</strong>, In Conference on Uncertainty in Artificial Intelligence, PMLR, 2021.<br><br></li>
<li><span class="STYLE1">Few-shot transfer learning for hereditary retinal diseases recognition. </span>
[<a href="files/2021_MICCAI_few_shot_OCT.pdf">PDF</a>] [<a href="files/2021_MICCAI_few_shot_OCT_poster.pdf">Poster</a>] [<a href="files/2021_MICCAI_few_shot_OCR.mp4">Video</a>] [<a href="files/">Bibtex</a>] [<a href="https://github.com/hatute/FSTL4HRDR">Code</a>]<br>
Siwei Mai, Qian Li, Qi Zhao, and <u>Mingchen Gao</u>.<br>
<strong>MICCAI'21</strong>, In International Conference on Medical Image Computing and Computer-Assisted Intervention, Springer, 2021.<br>
<span class="STYLE59 STYLE2" style="font-weight: bold;">Early Acceptance (13%), Student Travel Award</span><br><br></li>
<li><span class="STYLE1">Improving joint learning of chest x-ray and radiology report by word region alignment. </span>
[<a href="files/">PDF</a>]<br>
Zhanghexuan Ji, Mohammad Abuzar Shaikh, Dana Moukheiber, Sargur N. Srihari, Yifan Peng, and <u>Mingchen Gao</u>. <br>
<strong>MLMI'21</strong>, In International Workshop on Machine Learning in Medical Imaging, pages 110-119, Springer, 2021.<br><br></li>
<li><span class="STYLE1">Soft attention improves skin cancer classification performance. </span>
[<a href="files/">PDF</a>]<br>
Soumyya Kanti Datta, Mohammad Abuzar Shaikh, Sargur N. Srihari, and <u>Mingchen Gao</u>.<br>
<strong>IMIMIC'21</strong>, In Interpretability of Machine Intelligence in Medical Image Computing, and Topological Data Analysis and Its Applications for Medical Data, Springer, 2021.<br> <span class="STYLE59 STYLE2" style="font-weight: bold;">Oral Presentation</span><br><br></li>
<li><span class="STYLE1">Realistic lung nodule synthesis with multi-target co-guided adversarial mechanism. </span>
[<a href="files/">PDF</a>]<br>
Qiuli Wang, Xiaohong Zhang, Wei Zhang, <u>Mingchen Gao</u>, Sheng Huang, Jian Wang, Jiuquan Zhang, Dan Yang, and Chen Liu.<br>
<strong>TMI'21</strong>, In IEEE Transactions on Medical Imaging, 2021 <br><br></li>
<li> <span class="STYLE1">Weakly-supervised Brain Tumor Classification with Global Diagnosis Label. </span>
[<a href="files/">PDF</a>]<br>
Yufan Zhou, Zheshuo Li, Chunwei Ma, Changyou Chen, <u>Mingchen Gao</u>, Hong Zhu, Jinhui Xu.<br>
<strong>ISBI'20</strong>, In IEEE International Symposium on Biomedical Imaging, 2020 <br><br></li>
<li> <span class="STYLE1">An end-to-end learnable Flow regularized model for brain tumor segmentation. </span>
[<a href="files">PDF</a>]<br>
Yan Shen, Zhanghexuan Ji and <u>Mingchen Gao</u>.<br>
<strong>MLMI'20</strong>, International Workshop on Machine Learning in Medical Imaging, pages 532-541. Springer, 2020. <br><br></li>
<li> <span class="STYLE1">Neural Style Transfer Improves 3D Cardiovascular MR Image Segmentation on Inconsistent Data. </span>
[<a href="files/2019_MICCAI_StyleTransfer.pdf">PDF</a>]<br>
Chunwei Ma, Zhanghexuan Ji, and <u>Mingchen Gao</u>.<br>
<strong>MICCAI'19</strong>, In International Conference on Medical Image Computing and Computer-Assisted Intervention, pages 128-136. Springer, 2019 <br><br></li>
<li> <span class="STYLE1">Scribble-Based Hierarchical Weakly Supervised Learning for Brain Tumor Segmentation. </span>
[<a href="files/2019_MICCAI_ScribbleWeakly.pdf">PDF</a>]<br>
Zhanghexuan Ji, Yan Shen, Chunwei Ma, and <u>Mingchen Gao</u>.<br>
<strong>MICCAI'19</strong>, In International Conference on Medical Image Computing and Computer-Assisted Intervention, pages 175-183. Springer, 2019 <br><br></li>
<li> <span class="STYLE1">Intramodality Domain Adaptation Using Self Ensembling and Adversarial Training. </span>
[<a href="files/2019_DART_domain_adaptation_mri.pdf">PDF</a>]<br>
Zahil Shanis, Samuel Gerber, <u>Mingchen Gao</u>, and Andinet Enquobahrie .<br>
<strong>DART'19</strong>, In Domain Adaptation and Representation Transfer and Medical Image Learning with Less Labels and Imperfect Data, pages 28-36. Springer, 2019 <br><br></li>
<li> <span class="STYLE1">Brain tumor segmentation on MRI with missing modalities. </span>
[<a href="files/2019_IPMI_BrainMRIMissingChannels.pdf">PDF</a>]<br>
Yan Shen and <u>Mingchen Gao</u>.<br>
<strong>IPMI'19</strong>, In International Conference on Information Processing in Medical Imaging, pages 417-428. Springer, 2019. <br><br></li>
<li> <span class="STYLE1">Dynamic routing on deep neural network for thoracic disease classification and sensitive area localization. </span>
[<a href="files/2018_MLMI_Capsule_XRAY.pdf">PDF</a>]<br>
Yan Shen and <u>Mingchen Gao</u>.<br>
<strong>MLMI'18</strong>, International Workshop on Machine Learning in Medical Imaging, pages 389-397. Springer, 2018. <br><br></li>
<li> <span class="STYLE1">Holistic brain tumor screening and classification based on densenet and recurrent neural network. </span>
[<a href="files/2018_BrainLes.pdf">PDF</a>]<br>
Yufan Zhou, Zheshuo Li, Hong Zhu, Changyou Chen, <u>Mingchen Gao</u>, Kai Yu, and Jinhui Xu<br>
<strong>BrainLes'18</strong>, Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, 2018.<br><br></li>
<li> <span class="STYLE1">Joint solution for pet image segmentation, denoising, and partial volume correction. </span>
[<a href="">PDF</a>]<br>
Ziyue Xu, <u>Mingchen Gao</u>, Georgios Z Papadakis, Brian Luna, Sanjay Jain, Daniel J Mollura, and Ulas Bagci.<br>
<strong>Media'18</strong>, Medical image analysis, 46:229-243, 2018 <br><br></li>
<li><span class="STYLE1">Quantitative image quality comparison of reduced-and standard-dose dual-energy multiphase chest, abdomen, and pelvis CT. </span>
[<a href="files/2017_buty_quantitative_image_quality.pdf">PDF</a>]<br>
Mario Buty, Ziyue Xu, Aaron Wu, <u>Mingchen Gao</u>, Chelyse Nelson, Georgios Z Papadakis, Uygar Teomete, Haydar Celik, Baris Turkbey, Peter Choyke, et al.<br>
<strong>Tomography'17</strong>, Tomography: a journal for imaging research, 3(2):114, 2017.<br><br></li>
<li><span class="STYLE1">Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning. </span>
[<a href="files/2016_TMI_dCNN.pdf">PDF</a>]<br>
Hoo-Chang Shin, Holger R. Roth, <u>Mingchen Gao</u>, Le Lu, Ziyue Xu, Isabella Nogues, Jianhua Yao, Daniel Mollura, Ronald M. Summers.<br>
<strong>TMI'16</strong>, IEEE Transactions on Medical Imaging, 35.5 (2016): 1285-1298.<br><br></li>
<li><span class="STYLE1">Multi-label Deep Regression and Unordered Pooling for Holistic Interstitial Lung Disease Detection. </span>
[<a href="files/2016_MLMI_ILD_Detection.pdf">PDF</a>]
[<a href="files/2016_MLMI_ILD_Detection_Poster.pdf">Poster</a>]<br>
<u> Mingchen Gao</u>, Ziyue Xu, Le Lu, Adam P. Harrison, Ronald M. Summers, Daniel J. Mollura.<br>
<strong>MLMI'16</strong>, International Workshop on Machine Learning in Medical Imaging, 147-155, October 2016.<br><br></li>
<li> <span class="STYLE1">Segmentation Label Propagation using Deep Convolutional Neural Networks and Dense Conditional Random Field.</span> [<a href="files/2016_ISBI_label_propogation.pdf">PDF</a>][<a href="files/2016_ISBI_label_propogation_poster.pdf">Poster</a>]<br>
<u>Mingchen Gao</u>, Ziyue Xu, Le Lu, Aaron Wu, Isabella Nogues, Ronald M. Summers, Daniel J. Mollura.<br>
<strong>ISBI'16</strong>, IEEE International Symposium on Biomedical Imaging, 1265-1268, April 2016.<br><br></li>
<li><span class="STYLE1">Holistic Classification of CT Attenuation Patterns for Interstitial Lung Diseases via Deep Convolutional Neural Networks. </span>
[<a href="files/2016_CMBBE_holistic_classification.pdf">PDF</a>][<a href="files/2016_CMBBE_holistic_classification_poster.pdf">Poster</a>]<br>
<u>Mingchen Gao</u>, Ulas Bagci, Le Lu, Aaron Wu, Mario Buty, Hoo-Chang Shin, Holger R. Roth, Georgios Z. Papadakis, Adrien Depeursinge, Ronald M. Summers, Ziyue Xu, Daniel J. Mollura<br>
<strong>CMBBE'16</strong>, Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization (2016): 1-6.<br><br></li>
<li><span class="STYLE1">Characterization of Lung Nodule Malignancy using Hybrid Shape and Appearance Features. </span> <br>
Mario Buty, Ziyue Xu, <u>Mingchen Gao</u>, Ulas Bagci, Aaron Wu, Daniel J. Mollura. <br>
<strong>MICCAI'16</strong>, International Conference on Medical Image Computing and Computer Assisted Intervention, 662-670, October 2016. <br><br></li>
<li> <span class="STYLE1">Deep Vessel Tracking: a Generalized Probabilistic Approach via Deep Learning.</span> <br>
Aaron Wu, Ziyue Xu, <u>Mingchen Gao</u>, Mario Buty, Daniel J. Mollura.<br>
<strong>ISBI'16</strong>, IEEE International Symposium on Biomedical Imaging, 1265-1268, April 2016.<br><br></li>
<li><span class="STYLE1">Highly Precise Partial Volume Correction for PET Images: An
Iterative Approach Via Shape Consistency. </span>[<a href="files/Xu_ISBI2015_PVC.pdf">PDF</a>]<br />
Ziyue Xu, Ulas Bagci, <u>Mingchen Gao</u>, Daniel J. Mollural. <br />
<strong>ISBI'15</strong>, IEEE International Symposium on Biomedical Imaging, April, 2015. <br />
<span class="STYLE59 STYLE2" style="font-weight: bold;">Oral Presentation </span></li>
</ul>
<ul>
<li><span class="STYLE1">Unbalanced Graph-Based Transduction on Superpixels for Automatic Cervigram Image Segmentation. </span>[<a href="files/Huang_ISBI2015_GraphTransduction.pdf">PDF</a>]<br />
Sheng Huang, <u> Mingchen Gao</u>, Dan Yang, Xiaolei Huang, Ahmed Elgammal, Xiaohong Zhang.<br />
<strong>ISBI'15</strong>, IEEE International Symposium on Biomedical Imaging, April 2015. <br />
<span class="STYLE59 STYLE2" style="font-weight: bold;">Oral Presentation</span></li>
</ul>
<ul>
<li><span class="STYLE1">Morphological Analysis of the Papillary Muscles and the Trabaculae. </span>[<a href="files/MingchenGao_ISBI2014_Morphological.pdf">PDF</a>]<br />
<u>Mingchen Gao</u>, Chao Chen, Shaoting Zhang, Zhen Qian, Mani Vannan, Sarah Rinehart, Dimitris Metaxas, Leon Axel. <br />
<strong>ISBI'14</strong>, IEEE International Symposium on Biomedical Imaging, <span itemprop="pagination">373-376</span>. </li>
</ul>
<ul>
<li><span class="STYLE1">Saliency-based Rotation Invariant Description for Wrist Detection in Whole Body CT Images.</span> [<a href="files/MingchenGao_ISBI2014_WristDetection.pdf">PDF</a>]<br />
<u>Mingchen Gao</u>, Yiqiang Zhan, Gerardo Hermosillo, Yoshihisa Shinagawa, Dimitris Metaxas, Xiang Sean Zhou.<br />
<strong>ISBI'14</strong>, IEEE International Symposium on Biomedical Imaging, 117-120. </li>
</ul>
<ul>
<li><span class="STYLE1">Segmenting the Papillary Muscles and the Trabeculae from High Resolution
Cardiac CT through Restoration of Topological Handles.</span> [<a href="files/IPMI_13.pdf">PDF</a>]<br />
<u>Mingchen Gao</u>, Chao Chen, Shaoting Zhang, Zhen Qian, Dimitris Metaxas, Leon Axel.<br />
<strong>IPMI'13</strong>, The 23rd biennial International Conference on Information Processing, June, 2013. </li>
</ul>
<ul>
<li><span class="STYLE58 STYLE1">3D Anatomical Shape Atlas Construction using Mesh Quality Preserved Deformable Models.</span> [<a href="files/Zhang_CVIU.pdf">PDF</a>] <br />
Shaoting Zhang, Yiqiang Zhan, Xinyi Cui, <u>Mingchen Gao</u>, Junzhou Huang, Dimitris Metaxas.<br />
<strong>CVIU'13</strong>, Computer Vision and Image Understanding, Volume 117, Issue 9, Pages 1061-1071, 2013. </li>
</ul>
<ul>
<li><span class="STYLE58 STYLE1">High Resolution Cardiac Shape Registration using RICCI Flow.</span> [<a href="files/ISBI_13_ricci.pdf">PDF</a>]<br />
<u>Mingchen Gao</u>, Rui Shi, Shaoting Zhang, Wei Zeng, Zhen Qian, Xianfeng Gu, Dimitris Metaxas,Leon Axel.<br />
<strong>ISBI'13</strong>, IEEE International Symposium on Biomedical Imaging, April, 2013. </li>
</ul>
<ul>
<li><span class="STYLE58 STYLE1">Papillary Muscles Analysis from High Resolution CT using Spatial-Temporal Skeleton Extraction.</span> [<a href="files/ISBI_13_PM.pdf">PDF</a>]<br \ />
Lin Zhong, Shaoting Zhang, <u>Mingchen Gao</u>, Junzhou Huang, Zhen Qian, Dimitris Metaxas, Leon Axel.<br \ />
<strong>ISBI'13</strong>, IEEE International Symposium on Biomedical Imaging, April, 2013. </li>
</ul>
<ul>
<li><span class="STYLE58 STYLE1">Practical Patient-Specifc Cardiac Blood Flow Simulations Using SPH.</span> [<a href="files/ISBI_13_fluid.pdf">PDF</a>]<br />
Scott Kulp, <u>Mingchen Gao</u>, Shaoting Zhang, Zhen Qian, Szilard Voros, Dimitris Metaxas, Leon Axel.<br />
<strong>ISBI'13</strong>, IEEE International Symposium on Biomedical Imaging, April, 2013. </li>
</ul>
<ul>
<li><span class="STYLE58 STYLE1">Simplified Labeling Process for Medical Image Segmentation.</span> [<a href="files/MICCAI_12.pdf">PDF</a>]<br />
<u>Mingchen Gao</u>, Junzhou Huang, Xiaolei Huang, Shaoting Zhang, Dimitris Metaxas. <br />
<strong>MICCAI'12</strong>, Proc. of the 15thInternational Conference on Medical Image Computing and Computer Assisted Intervention, 2012. </li>
</ul>
<ul>
<li><span class="STYLE58 STYLE1"> Towards Robust Device-Free Passive Localization through Automatic Camera Assisted Recalibration.</span><br />
Chenren Xu, <u>Mingchen Gao</u>, Bernhard Firner, Yanyong Zhang, Richard Howard, Jun Li. <br />
<strong>Sensys'12</strong>, Proc. of the 10th ACM Conference on Embedded Networked Sensor Systems, November, 2012. </li>
</ul>
<ul>
<li><span class="STYLE58 STYLE1">4D Cardiac Reconstruction Using High Resolution CT Images.</span> [<a href="files/FIMH_11.pdf">PDF</a>] <a href="images/normal.gif">[Video]</a><br />
<u>Mingchen Gao</u>, Junzhou Huang, Shaoting Zhang, Zhen Qian, Szilard Voros, Dimitris Metaxas, Leon Axel. <br />
<strong>FIMH'11</strong>, Proc. of theSixth International Conference on Functional Imaging and Modeling of the Heart, May, 2011. <br />
<span class="STYLE59 STYLE2" style="font-weight: bold;">Best Paper Award</span></li>
</ul>
<ul>
<li><span class="STYLE58 STYLE1">Construction of Left Ventricle 3D Shape Atlas from Cardiac MRI.</span><br />
Shaoting Zhang, Mustafa Uzunbas, Zhennan Yan, <u>Mingchen Gao</u>, Junzhou Huang, Dimitris Metaxas, Leon Axel. <br />
<strong>FIMH '11</strong>, Proc. of the Sixth International Conference on Functional Imaging and Modeling of the Heart, May, 2011. </li>
</ul>
<ul>
<li><span class="STYLE58 STYLE1">Abnormal Detection Using Interaction Energy Potentials.</span> [<a href="files/XinyiCui_CVPR2011.pdf">PDF</a>]<br />
Xinyi Cui, Qingshan Liu, <u>Mingchen Gao</u>, Dimitris N. Metaxas.<br />
<strong>CVPR'11</strong>, Proc. of the 24th IEEE Conference on Computer Vision and Pattern Recognition, June, 2011. </li>
</ul>
<ul>
<li><span class="STYLE58 STYLE1">Using High Resolution Cardiac CT Data to Model and Visualize Patient-Specifc Interactions Between Trabeculae and Blood Flow.</span> [<a href="files/Kulp_MICCAI2011_BloodFlow.pdf">PDF</a>]<br />
Scott Kulp, <u>Mingchen Gao</u>, Zhen Qian, Szilard Voros, Dimitris Metaxas, Leon Axel. <br />
<strong>MICCAI'11</strong>, Proc. of the 14th International Conference on Medical Image Computing and Computer Assisted Intervention, September, 2011.</li>
</ul>
<p><strong>Patents, Invention Records:</strong></p>
<ul>
<li><span class="STYLE1">Sub-Query Evaluation for Image Search</span>. <br />
Kunlong Gu, Charles J. Rosenberg, <u>Mingchen Gao</u>.<br />
Patent pending. (Google) </li>
</ul>
<ul>
<li><span class="STYLE1">Detection of Arbitrarily Rotated Anatomies using Rotation-invariant Salient Configurations.</span><br />
<u>Mingchen Gao</u>, Yiqiang Zhan, Gerardo Hermosillo, Yoshihisa Shinagawa, Xiang Sean Zhou.<br />
Invention disclosure. (Siemens) </li>
</ul>
<p class="STYLE41"><strong>Services: </strong></p>
<ul>
<li class="STYLE41">NIH EITA study section in 03/2021, NSF panelist </li>
<li class="STYLE41">Area Chair and Session Chair for International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI) 2021, 2022 </li>
<li class="STYLE41">Senior Program Committee for AAAI Conference on Artificial Intelligence (AAAI) 2022 </li>
<li class="STYLE41">Reviewer for Nature Communications, IEEE Transactions on Medical Imaging (TMI), Medical Image Analysis (MedIA), Medical Physics, NeuIPS (2021), ICLR (2022), MICCAI (2012-2020), ISBI (2013-2021), MIDL (2019)</li>
</ul>
<hr />
<a href="http://www.acsu.buffalo.edu/~kangsun/">Kang Sun</a>, my husband</td>
</tr>
</table>
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