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Protein-coding gene in the species Homo sapiens
CHL1
Identifiers
AliasesCHL1, CALL, L1CAM2, cell adhesion molecule L1 like
External IDsOMIM: 607416; MGI: 1098266; HomoloGene: 21314; GeneCards: CHL1; OMA:CHL1 - orthologs
Gene location (Human)
πŸ‘ Chromosome 3 (human)
Chr.Chromosome 3 (human)[1]
Band3p26.3Start196,763 bp[1]
End409,417 bp[1]
Gene location (Mouse)
πŸ‘ Chromosome 6 (mouse)
Chr.Chromosome 6 (mouse)[2]
Band6|6 E1Start103,487,547 bp[2]
End103,727,172 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Brodmann area 23

  • endothelial cell

  • superior frontal gyrus

  • sural nerve

  • spinal ganglia

  • postcentral gyrus

  • frontal pole

  • Brodmann area 10

  • trigeminal ganglion

  • middle temporal gyrus
Top expressed in
  • spermatid

  • subiculum

  • ventral tegmental area

  • lobe of cerebellum

  • lateral hypothalamus

  • dorsomedial hypothalamic nucleus

  • supraoptic nucleus

  • substantia nigra

  • cerebellar vermis

  • ventromedial nucleus
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

10752

12661

Ensembl

ENSG00000134121

ENSMUSG00000030077

UniProt

O00533

P70232

RefSeq (mRNA)

NM_001253387
NM_001253388
NM_006614

NM_007697

RefSeq (protein)

NP_001240316
NP_001240317
NP_006605

NP_031723

Location (UCSC)Chr 3: 0.2 – 0.41 MbChr 6: 103.49 – 103.73 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Neural cell adhesion molecule L1-like protein also known as close homolog of L1 (CHL1) is a protein that in humans is encoded by the CHL1 gene.[6]

CHL1 is a cell adhesion molecule closely related to the L1. In melanocytic cells CHL1 gene expression may be regulated by MITF,[7] and can act as a helicase protein during the interphase stage of mitosis.

The protein, however, has dynamic localisation, meaning that it has not only multiple roles in the cell, but also various locations.

References

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  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000134121 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000030077 – Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Pandey, G.; Kanwar, P.; Pandey, A. (2014). Global Comparative Analysis of CBL-CIPK Gene Families in Plants. Springer International Publishing. p. 52. ISBN 978-3-319-09078-8.
  6. ^ Wei MH, Karavanova I, Ivanov SV, Popescu NC, Keck CL, Pack S, Eisen JA, Lerman MI (September 1998). "In silico-initiated cloning and molecular characterization of a novel human member of the L1 gene family of neural cell adhesion molecules". Hum. Genet. 103 (3): 355–64. doi:10.1007/s004390050829. PMID 9799093. S2CID 3177127.
  7. ^ Hoek KS, Schlegel NC, Eichhoff OM, et al. (2008). "Novel MITF targets identified using a two-step DNA microarray strategy". Pigment Cell Melanoma Res. 21 (6): 665–76. doi:10.1111/j.1755-148X.2008.00505.x. PMID 19067971. S2CID 24698373.

Further reading

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External links

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