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⇱ Caspase 12 - Wikipedia


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Protein found in humans
CASP12
Identifiers
AliasesCASP12, CASP-12, CASP12P1, caspase 12 (gene/pseudogene), caspase 12, Caspase-12, Caspase_12, IPR035713
External IDsOMIM: 608633; MGI: 1312922; GeneCards: CASP12; OMA:CASP12 - orthologs
Gene location (Human)
👁 Chromosome 11 (human)
Chr.Chromosome 11 (human)[1]
Band11q22.3Start104,885,718 bp[1]
End104,898,670 bp[1]
Gene location (Mouse)
👁 Chromosome 9 (mouse)
Chr.Chromosome 9 (mouse)[2]
Band9 A1|9 2.46 cMStart5,345,430 bp[2]
End5,373,032 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • testicle

  • right lung

  • left ovary

  • gastric mucosa

  • ascending aorta

  • Descending thoracic aorta

  • popliteal artery

  • tibial arteries

  • left coronary artery

  • right ovary
Top expressed in
  • temporal muscle

  • tunica media of zone of aorta

  • sternocleidomastoid muscle

  • lumbar spinal ganglion

  • triceps brachii muscle

  • intercostal muscle

  • uterus

  • carotid body

  • ascending aorta

  • semi-lunar valve
More reference expression data
BioGPS
n/a
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

100506742

12364

Ensembl

ENSG00000204403

ENSMUSG00000025887

UniProt

Q6UXS9

O08736

RefSeq (mRNA)

NM_001191016

NM_009808

RefSeq (protein)

NP_001177945

NP_033938

Location (UCSC)Chr 11: 104.89 – 104.9 MbChr 9: 5.35 – 5.37 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Caspase 12 is a protein that in humans is encoded by the CASP12 gene. The protein belongs to a family of enzymes called caspases which cleave their substrates at C-terminal aspartic acid residues. It is closely related to caspase 1 and other members of the caspase family, known as inflammatory caspases, which process and activate inflammatory cytokines such as interleukin 1 and interleukin 18.

Gene

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It is found on chromosome 11 in humans in a locus with other inflammatory caspases.[5] CASP12 orthologs[6] have been identified in numerous mammals for which complete genome data are available.

Clinical significance

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The CASP12 gene is subject to polymorphism, which can generate a full-length caspase protein (Csp12L) or an inactive truncated form (Csp12S). The functional form appears to be confined to people of African descent and is linked with susceptibility to sepsis; people carrying the functional gene have decreased responses to bacterial molecules such as lipopolysaccharide (LPS).[7][8]

A study in May 2009 by McGill University Health Centre has suggested that estrogen may serve to block the production of caspase-12, resulting in a stronger inflammatory reaction to bacterial pathogens. The trials were carried out on laboratory mice which had been implanted with the human caspase-12 gene.[9][10][11]

The inactive truncated form (Csp12S) of the CASP12 gene was spread and nearly fixed in non-African populations due to positive selection beginning perhaps 60–100 thousand years ago. Its selective advantage is thought to be sepsis resistance in populations that experienced more infectious diseases as population sizes and densities increased.[12][13]

References

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  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000204403Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000025887Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Fischer H, Koenig U, Eckhart L, Tschachler E (2002). "Human caspase 12 has acquired deleterious mutations". Biochemical and Biophysical Research Communications. 293 (2): 722–726. doi:10.1016/S0006-291X(02)00289-9. PMID 12054529.
  6. ^ "OrthoMaM phylogenetic marker: CASP12 coding sequence".[permanent dead link]
  7. ^ Saleh M, Vaillancourt JP, Graham RK, Huyck M, Srinivasula SM, Alnemri ES, et al. (2004). "Differential modulation of endotoxin responsiveness by human caspase-12 polymorphisms". Nature. 429 (6987): 75–79. Bibcode:2004Natur.429...75S. doi:10.1038/nature02451. PMID 15129283.
  8. ^ Saleh M, Mathison JC, Wolinski MK, Bensinger SJ, Fitzgerald P, Droin N, et al. (April 2006). "Enhanced bacterial clearance and sepsis resistance in caspase-12-deficient mice". Nature. 440 (7087): 1064–1068. Bibcode:2006Natur.440.1064S. doi:10.1038/nature04656. PMID 16625199. S2CID 4321520. (Erratum: doi:10.1038/nature04656, PMID 16625199)
  9. ^ Yeretssian G, Doiron K, Shao W, Leavitt BR, Hayden MR, Nicholson DW, et al. (May 2009). "Gender differences in expression of the human caspase-12 long variant determines susceptibility to Listeria monocytogenes infection". Proceedings of the National Academy of Sciences of the United States of America. 106 (22): 9016–9020. Bibcode:2009PNAS..106.9016Y. doi:10.1073/pnas.0813362106. PMC 2690057. PMID 19447924.
  10. ^ "Man flu: real or myth?". Health. NHS UK. 18 May 2009. Archived from the original on 16 February 2010. Retrieved 23 May 2009.
  11. ^ "Women 'fight off disease better'". Health. BBC News. 13 May 2009. Retrieved 13 May 2009.
  12. ^ Xue Y, Daly A, Yngvadottir B, Liu M, Coop G, Kim Y, et al. (April 2006). "Spread of an inactive form of caspase-12 in humans is due to recent positive selection". American Journal of Human Genetics. 78 (4): 659–670. doi:10.1086/503116. PMC 1424700. PMID 16532395.
  13. ^ Wang X, Grus WE, Zhang J (March 2006). "Gene losses during human origins". PLoS Biology. 4 (3) e52. doi:10.1371/journal.pbio.0040052. PMC 1361800. PMID 16464126.

External links

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