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⇱ SCFD1 - Wikipedia


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From Wikipedia, the free encyclopedia
Protein-coding gene in the species Homo sapiens
SCFD1
👁 Image
Identifiers
AliasesSCFD1, C14orf163, RA410, SLY1, SLY1P, STXBP1L2, sec1 family domain containing 1
External IDsOMIM: 618207; MGI: 1924233; HomoloGene: 5650; GeneCards: SCFD1; OMA:SCFD1 - orthologs
Gene location (Human)
👁 Chromosome 14 (human)
Chr.Chromosome 14 (human)[1]
Band14q12Start30,622,291 bp[1]
End30,737,694 bp[1]
Gene location (Mouse)
👁 Chromosome 12 (mouse)
Chr.Chromosome 12 (mouse)[2]
Band12|12 B3Start51,424,293 bp[2]
End51,496,884 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • Achilles tendon

  • body of pancreas

  • anterior pituitary

  • parotid gland

  • corpus epididymis

  • oral cavity

  • mucosa of paranasal sinus

  • islet of Langerhans

  • biceps brachii

  • bone marrow cell
Top expressed in
  • seminal vesicula

  • parotid gland

  • islet of Langerhans

  • calvaria

  • dermis

  • lobe of prostate

  • efferent ductule

  • olfactory epithelium

  • pituitary gland

  • Gonadal ridge
More reference expression data
BioGPS
👁 Image
More reference expression data
Gene ontology
Molecular function
Cellular component
Biological process
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

23256

76983

Ensembl

ENSG00000092108

ENSMUSG00000020952

UniProt

Q8WVM8

Q8BRF7

RefSeq (mRNA)
NM_001257376
NM_001283031
NM_001283032
NM_001283033
NM_016106

NM_182835

NM_029825
NM_001306178

RefSeq (protein)
NP_001244305
NP_001269960
NP_001269961
NP_001269962
NP_057190

NP_878255

NP_001293107
NP_084101

Location (UCSC)Chr 14: 30.62 – 30.74 MbChr 12: 51.42 – 51.5 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Sec1 family domain-containing protein 1 is a protein that in humans is encoded by the SCFD1 gene.[5]

Interactions

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SCFD1 has been shown to interact with USO1.[6][7]

References

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  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000092108Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000020952Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ "Entrez Gene: SCFD1 sec1 family domain containing 1".
  6. ^ Shorter J, Beard MB, Seemann J, Dirac-Svejstrup AB, Warren G (April 2002). "Sequential tethering of Golgins and catalysis of SNAREpin assembly by the vesicle-tethering protein p115". J. Cell Biol. 157 (1): 45–62. doi:10.1083/jcb.200112127. PMC 2173270. PMID 11927603.
  7. ^ Allan BB, Moyer BD, Balch WE (July 2000). "Rab1 recruitment of p115 into a cis-SNARE complex: programming budding COPII vesicles for fusion". Science. 289 (5478): 444–8. Bibcode:2000Sci...289..444A. doi:10.1126/science.289.5478.444. PMID 10903204.

Further reading

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