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varvis-download Public
A CLI tool to download genomic analysis files from the Varvis API. Supports authentication, file type selection, proxy settings, and destination directory specification.
JavaScript 10
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score-assemblies Public
Snakemake workflow for scoring and comparing multiple bacterial genome assemblies (Illumina, Nanopore) to reference genome(s).
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ont-assembly-snake Public
Snakemake workflow for bacterial genome assembly + polishing for Oxford Nanopore (ONT) sequencing using multiple tools.
Repositories
- varvis-download Public
A CLI tool to download genomic analysis files from the Varvis API. Supports authentication, file type selection, proxy settings, and destination directory specification.
- TBProfiler Public Forked from jodyphelan/TBProfiler
Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data
- action-gh-release Public Forked from softprops/action-gh-release
📦 👁 :octocat:
GitHub Action for creating GitHub Releases -
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- MultiQC Public Forked from MultiQC/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
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- setup-gh Public Forked from actions4gh/setup-gh
👨💻 Install & configure the GitHub CLI (gh) in your GitHub Actions runner
- chatgpt-mattermost-bot.fork Public archive Forked from yGuy/chatgpt-mattermost-bot
A very simple implementation of a service for a mattermost bot that uses ChatGPT in the backend.
- simple_baserow_api Public archive Forked from KuechlerO/simple_baserow_api
A simple python wrapper for the baserow API
