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scTenifoldKnk Public

R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.

R 201 20
scTenifoldNet Public

A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data

R 33 4
scTenifoldXct Public

Manifold learning to detect cell-cell interactions.

Jupyter Notebook 8 3
QuantumGRN Public

Quantum Gene Regulatory Networks with Application to Single-cell Data

Jupyter Notebook 24 13
QUBO_Feature_Selection Public

Feature Selection QUBO (Quadratic Unconstrained Binary Optimization)

Jupyter Notebook 4 4

Showing 10 of 28 repositories

cailab-tamu.github.io Public

HTML 0 0 0 0 Updated
scTenifoldNet Public
A R/MATLAB package to construct and compare gene regulatory networks from single-cell transcriptomic data

R 33 4 5 0 Updated
scTenifoldKnk Public
R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.

R 201 20 31 0 Updated
qSimCells Public
A Quantum Generative Framework for Modeling Single-Cell Transcriptomes with Gene-Gene and Cell-Cell Interactions

Jupyter Notebook 0 0 0 0 Updated
QUBO_Feature_Selection Public
Feature Selection QUBO (Quadratic Unconstrained Binary Optimization)

Jupyter Notebook 4 4 0 0 Updated
scTenifoldXct Public
Manifold learning to detect cell-cell interactions.

Jupyter Notebook 8 MIT 3 4 1 Updated
Spline-DV Public

MATLAB 1 0 0 0 Updated
QuantumGRN Public
Quantum Gene Regulatory Networks with Application to Single-cell Data

Jupyter Notebook 24 MIT 13 0 0 Updated
GenKI Public Forked from yjgeno/GenKI

Python 0 MIT 10 0 0 Updated
sm-scTenifoldNet Public
Support material for "scTenifoldNet: A Machine Learning Workflow for Constructing and Comparing Transcriptome-wide Gene Regulatory Networks from Single-Cell Data"

R 0 0 0 0 Updated