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Bioinformatics-Workshops Public

Workshops presented by the Gladstone Bioinformatics Core

HTML 246 82
Interactive-Enrichment-Analysis Public

A set of Shiny apps to provide interactive enrichment analysis and exploration of results.

R 31 8
bibliometrics Public

Python 7 9
LODopt Public

R package for cell type abundance association analysis for single cell data.

R 3
clustOpt Public

Optimizing the resolution parameter for Seurat's FindClusters

R 2 1
rankSummaries Public

code for the rankSummary analysis. Used for Morris Water Maze analyses

R 1

Showing 10 of 52 repositories

LODopt Public
R package for cell type abundance association analysis for single cell data.

R 3 0 0 0 Updated
GeneSet_Translator Public
Streamlit application for multi-gene TRAPI query integration with NetworkX clustering and LLM-assisted exploration using Cytoscape.js visualization.

Jupyter Notebook 1 MIT 1 0 0 Updated
clustOpt Public
Optimizing the resolution parameter for Seurat's FindClusters

R 2 1 7 0 Updated
bioinformatics-participation Public
For certificates of participation in Bioinformatics Workshops

JavaScript 0 0 1 0 Updated
Bioinformatics-Workshops Public
Workshops presented by the Gladstone Bioinformatics Core

HTML 246 82 14 0 Updated
GB_LZ_1373_Transplantation_of_V2as_Manuscript Public
Code for analysis of single-cell/nuclei RNA-seq data in the Transplantation of V2as Manuscript (with Lana Zholudeva et al.)

R 0 MIT 0 0 0 Updated
RMeDPower2 Public
Helping design and analyses of data from repeated measures experiments

HTML 1 0 0 0 Updated
Interactive-Enrichment-Analysis Public
A set of Shiny apps to provide interactive enrichment analysis and exploration of results.

R 31 8 12 0 Updated
ccs-subread-align Public

Python 0 AGPL-3.0 0 0 0 Updated
supremo_lite Public
A lightweight memory first implementation of SuPreMo

Python 0 MIT 0 1 0 Updated

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