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URL: https://github.com/wikipathways

⇱ WikiPathways · GitHub

Welcome to the WikiPathways Github Organization 👋

👩‍💻 Core Repositories

WikiPathways website - Frontend for pathway database
WikiPathways database - GPML and metadata for approved pathways
WikiPathways assets - JSON, PNG and SVG for approved pathways
WikiPathways homology - Homology-converted GPMLs by organism
Development projects - for developer project planning

🙋‍♀️ Help and Disscussion forums

Help - Public help forum
FAQ - Frequently Asked Questions
Pathway Curation Tasks - Prioritized pathway curation tasks; for beginners, advanced and domain-specific authors
Dev chat - Developer discussions

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wikipathways-database Public

WikiPathways Database

Shell 12 21
pvjs Public

JavaScript-based pathway viewer and editor

TypeScript 35 19
rWikiPathways Public

R package for WikiPathways API

HTML 19 6
pywikipathways Public

Python Client Package for WikiPathways

Python 24 5

Repositories

Showing 10 of 161 repositories

wikipathways.github.io Public
GitHub pages for GPML-Repo

HTML 9 25 17 (1 issue needs help) 0 Updated
wikipathways-database Public
WikiPathways Database

Shell 12 21 16 (1 issue needs help) 0 Updated
pfocr-database Public
Jekyll setup and database for the Pathway Figure OCR project

HTML 0 CC0-1.0 5 6 0 Updated
Snorql-UI Public Forked from ammar257ammar/Snorql-UI

JavaScript 2 GPL-3.0 7 3 0 Updated
webservice Public

HTML 0 CC0-1.0 0 0 0 Updated
wikipathways-collection Public

Java 0 1 1 0 Updated
SPARQLQueries Public
Queries for the WikiPathways SPARQL endpoint.

Python 2 GPL-3.0 3 7 0 Updated
wikipathways-assets Public
Accessory files generated downstream of approved GPMLs

0 CC0-1.0 1 0 0 Updated
sparql-examples Public

HTML 0 0 0 0 Updated
fdp Public
Repository with the content of the WikiPathways FAIR Data Point.

HTML 0 MIT 0 4 0 Updated

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