VOOZH about

URL: https://pubmed.ncbi.nlm.nih.gov/32834990/

⇱ Sewage analysis as a tool for the COVID-19 pandemic response and management: the urgent need for optimised protocols for SARS-CoV-2 detection and quantification - PubMed


Clipboard, Search History, and several other advanced features are temporarily unavailable.
Skip to main page content
👁 Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

👁 Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Add to Collections

Add to My Bibliography

Your saved search

Create a file for external citation management software

Your RSS Feed

Abstract

COVID-19 is an ongoing global pandemic caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). As of July 29th 2020, more than 16,6 million cases have been reported in more than 188 countries/territories, leading to more than 659000 deaths. One of the main challenges facing health authorities has been testing for the virus on a sufficiently comprehensive scale. The pandemic has been an impetus for the wastewater community as it has inspired scientists to look to wastewater to help fill in the gap of measuring the prevalence of SARS-CoV-2 within a given community. Testing the wastewater may serve as an early warning system allowing timely interventions. Although viral shedding varies among individuals and over the course of their infection, the sewage system can blend these variations into an average that represents the wider studied community. The urgent need has led to a lack of coherent reporting of data regarding the analysis, as these huge and remarkable efforts by the wastewater scientific community were made in a very short time. Important information on the analytical approach is often lacking, while there is still no optimisation of the methodology, including sampling, sample storage and concentration, RNA extraction and detection/quantification. This review aims at identifying the main issues for consideration, relating to the development of validated methodological protocols for the virus quantitative analysis in wastewater. Their inclusion will enable the methodological optimisation of SARS-CoV-2 wastewater analyses, transforming the wastewater infrastructure into a source of useful information for the health sector.

Keywords: COVID-19; Protocol; Quality Control (QC); SARS-CoV-2; Wastewater-Based Epidemiology (WBE).

PubMed Disclaimer

Conflict of interest statement

The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Figures

👁 None
Graphical abstract
👁 Fig. 1
Fig. 1
Suggested key points according to each process step of the SARS-CoV-2 methodology for consideration.

References

    1. Daughton C. The international imperative to rapidly and inexpensively monitor community-wide Covid-19 infection status and trends. The Science of the total environment. 2020;726 - PMC - PubMed
    1. Brouwer A.F., Eisenberg J.N., Pomeroy C.D., Shulman L.M., Hindiyeh M., Manor Y., Grotto I., Koopman J.S., Eisenberg M.C. Epidemiology of the silent polio outbreak in Rahat, Israel, based on modeling of environmental surveillance data. Proceedings of the National Academy of Sciences. 2018;115(45):E10625–E10633. - PMC - PubMed
    1. Muirhead A., Zhu K., Brown J., Basu M., brinton M.A., Costa F., Hayat M.J., Stauber C.E. Zika Virus RNA persistence in sewage. Environmental Science and Technology Letters. 2020 doi: 10.1021/acs.estlett.0c00535. - DOI - PMC - PubMed
    1. Ahmed W., Bertsch P.M., Angel N., Bibby K., Bivins A., Dierens L., Edson J., Ehret J., Gyawali P., Hamilton K., Hosegood I., Hugenholtz P., Jiang G., Kitajima M., Sichani T., Shi J., Shimko K.M., Simpson S.L., Smith W.J.M., Symonds E.M., Thomas K.V., Verhagen R., Zaugg J., Mueller J.F. Detection of SARS-CoV-2 RNA in commercial passenger aircraft and cruise ship wastewater: a surveillance tool for assessing the presence of COVID-19 infected travelers. Journal of Travel Medicine, taaa116. 2020 doi: 10.1093/jtm/taaa116. - DOI - PMC - PubMed
    1. Chen L., Lou J., Bai Y., Wang M. COVID-19 disease with positive fecal and negative pharyngeal and sputum viral tests. American Journal of Gastroenterology. 2020:115. doi: 10.14309/ajg.0000000000000610. - DOI - PMC - PubMed

LinkOut - more resources

Cite

NCBI Literature Resources

MeSH PMC Bookshelf Disclaimer

The PubMed wordmark and PubMed logo are registered trademarks of the U.S. Department of Health and Human Services (HHS). Unauthorized use of these marks is strictly prohibited.