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dotnet add package BioFSharp --version 2.0.0
NuGet\Install-Package BioFSharp -Version 2.0.0
<PackageReference Include="BioFSharp" Version="2.0.0" />
<PackageVersion Include="BioFSharp" Version="2.0.0" />Directory.Packages.props
<PackageReference Include="BioFSharp" />Project file
paket add BioFSharp --version 2.0.0
#r "nuget: BioFSharp, 2.0.0"
#:package BioFSharp@2.0.0
#addin nuget:?package=BioFSharp&version=2.0.0Install as a Cake Addin
#tool nuget:?package=BioFSharp&version=2.0.0Install as a Cake Tool
Open source bioinformatics and computational biology toolbox written in F#.
| Product | Versions Compatible and additional computed target framework versions. |
|---|---|
| .NET | net5.0 net5.0 was computed. net5.0-windows net5.0-windows was computed. net6.0 net6.0 was computed. net6.0-android net6.0-android was computed. net6.0-ios net6.0-ios was computed. net6.0-maccatalyst net6.0-maccatalyst was computed. net6.0-macos net6.0-macos was computed. net6.0-tvos net6.0-tvos was computed. net6.0-windows net6.0-windows was computed. net7.0 net7.0 was computed. net7.0-android net7.0-android was computed. net7.0-ios net7.0-ios was computed. net7.0-maccatalyst net7.0-maccatalyst was computed. net7.0-macos net7.0-macos was computed. net7.0-tvos net7.0-tvos was computed. net7.0-windows net7.0-windows was computed. net8.0 net8.0 was computed. net8.0-android net8.0-android was computed. net8.0-browser net8.0-browser was computed. net8.0-ios net8.0-ios was computed. net8.0-maccatalyst net8.0-maccatalyst was computed. net8.0-macos net8.0-macos was computed. net8.0-tvos net8.0-tvos was computed. net8.0-windows net8.0-windows was computed. net9.0 net9.0 was computed. net9.0-android net9.0-android was computed. net9.0-browser net9.0-browser was computed. net9.0-ios net9.0-ios was computed. net9.0-maccatalyst net9.0-maccatalyst was computed. net9.0-macos net9.0-macos was computed. net9.0-tvos net9.0-tvos was computed. net9.0-windows net9.0-windows was computed. net10.0 net10.0 was computed. net10.0-android net10.0-android was computed. net10.0-browser net10.0-browser was computed. net10.0-ios net10.0-ios was computed. net10.0-maccatalyst net10.0-maccatalyst was computed. net10.0-macos net10.0-macos was computed. net10.0-tvos net10.0-tvos was computed. net10.0-windows net10.0-windows was computed. |
| .NET Core | netcoreapp2.0 netcoreapp2.0 was computed. netcoreapp2.1 netcoreapp2.1 was computed. netcoreapp2.2 netcoreapp2.2 was computed. netcoreapp3.0 netcoreapp3.0 was computed. netcoreapp3.1 netcoreapp3.1 was computed. |
| .NET Standard | netstandard2.0 netstandard2.0 is compatible. netstandard2.1 netstandard2.1 was computed. |
| .NET Framework | net461 net461 was computed. net462 net462 was computed. net463 net463 was computed. net47 net47 was computed. net471 net471 was computed. net472 net472 was computed. net48 net48 was computed. net481 net481 was computed. |
| MonoAndroid | monoandroid monoandroid was computed. |
| MonoMac | monomac monomac was computed. |
| MonoTouch | monotouch monotouch was computed. |
| Tizen | tizen40 tizen40 was computed. tizen60 tizen60 was computed. |
| Xamarin.iOS | xamarinios xamarinios was computed. |
| Xamarin.Mac | xamarinmac xamarinmac was computed. |
| Xamarin.TVOS | xamarintvos xamarintvos was computed. |
| Xamarin.WatchOS | xamarinwatchos xamarinwatchos was computed. |
Showing the top 5 NuGet packages that depend on BioFSharp:
| Package | Downloads |
|---|---|
|
BioFSharp.IO
Read/write functions for various biological file formats |
|
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BioFSharp.ML
Machine learning with BioFSharp and CNTK.Net. |
|
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BioFSharp.BioContainers
Open source bioinformatics and computational biology toolbox written in F#. |
|
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BioFSharp.Parallel
GPU parallelized functions from BioFSharp |
|
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ProteomIQon
ProteomIQon - computational proteomics |
This package is not used by any popular GitHub repositories.
| Version | Downloads | Last Updated |
|---|---|---|
| 2.0.0 | 522 | 4/25/2025 |
| 2.0.0-preview.3 | 2,932 | 5/11/2022 |
| 2.0.0-preview.2 | 302 | 2/13/2022 |
| 2.0.0-preview.1 | 342 | 1/26/2022 |
| 2.0.0-beta7 | 1,230 | 9/29/2021 |
| 2.0.0-beta6 | 1,221 | 5/10/2021 |
| 2.0.0-beta5 | 1,650 | 2/16/2021 |
| 2.0.0-beta4 | 6,029 | 6/24/2020 |
| 2.0.0-beta3 | 1,437 | 6/22/2020 |
| 2.0.0-beta2 | 1,438 | 6/22/2020 |
| 2.0.0-beta1 | 1,519 | 5/6/2020 |
| 2.0.0-beta | 1,530 | 4/28/2020 |
| 1.2.1-beta2 | 1,533 | 4/28/2020 |
| 1.2.1-beta1 | 1,419 | 4/28/2020 |
| 1.2.0 | 3,658 | 3/30/2020 |
| 1.1.0 | 1,989 | 3/23/2020 |
| 1.0.3 | 2,060 | 2/26/2020 |
| 1.0.2 | 2,054 | 2/19/2020 |
The new BioFSharp package now bundles the old BioFSharp and BioFSharp.IO packages.
The whole package has undergone a major rework. it now contains the following modules:
- `BioFSharp` - the core data model e.g. BioItems, Sequences, Alignments, etc.
- `BioFSharp.FileFormats` - data models for and functions to work with biological file formats
- `BioFSharp.CLIArgs` - DSLs for commonly used bioinformatic CLI tools such as BLAST or ClustalO. These DSLs are designed to be extended in the `BioFSharp.BioContainers` package to run the tools in containerized form.
- `BioFSharp.IO` - Parsers and writers for the datatypes defined in `BioFSharp.FileFormats`
- `BioFSharp.CLITools` - functions to execute CLITools using the DSLs defined in `BioFSharp.CLIArgs`
Additions:**
BioFSharp**:
[Breaking] [Conversion extensions for BioCollections]()
[Breaking] [Tagged Sequence and Phylogenetic Tree have been reworked as top level types](https://github.com/CSBiology/BioFSharp/commit/aec8232dd7725cdbb99a038ebe0c99f26922f31a)
[Add functionality to construct phylogenetic trees from clustered data or raw sequence data](https://github.com/CSBiology/BioFSharp/commit/aec8232dd7725cdbb99a038ebe0c99f26922f31a)