endothelial-cells

Here are 7 public repositories matching this topic...

jpviguerasguillen / feedback-non-local-attention-fNLA

Keras (Tensorflow) code for the manuscript 'DenseUNets with feedback non-local attention for the segmentation of specular images of the corneal endothelium with Fuchs dystrophy'

deep-neural-networks deep-learning medical-imaging attention segmentation unet attention-mechanism resnext keras-tensorflow cnn-segmentation unet-plusplus endothelial-cells unet-plus denseunet resunext non-local-attention denseunet-plus

Updated
Python

mbbio / SproutAngio

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A tool for quantitative analysis of sprouting angiogenesis and lumen space

retina-image-analysis angiogenesis endothelial-cells fibrin-bead-assay

Updated
Jupyter Notebook

Github page to compliment Chapter 29 'Endothelial Cell RNA-Seq Data: Differential Expression and Functional Enrichment Analyses to Study Phenotypic Switching' of Angiogenesis Methods and Protocols 2022. A user-friendly bioinformatics workflow to study RNA-seq data.

bioinformatics rna-seq endothelial-cells

Updated
R

Clotterdam / Laan-et-al-2023-CellProfiler

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OrganelleProfiler and OrganelleContentProfiler pipelines for CellProfiler as described in Laan et al (PLoS ONE, 2023)

cellprofiler imaging cell-biology endothelial-cells vwf cellprofiler-pipeline weibel-palade-bodies secretory-pathway

Updated

exr98 / HCA-uncovers-metastable-phenotypes-in-hEC-monolayers

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Repository for "High Content Analysis uncovers metastable phenotypes in human endothelial cell monolayers and key features across distinct populations".

shiny hca endothelial-cells high-content-analysis