Fast, state-of-the-art ab initio prediction of protein secondary structure in 3 and 8 classes
machine-learning deep-learning proteins secondary-structure psi-blast protein-structure-prediction hhblit
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- C++
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psi-blast
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State-of-the-art ab initio prediction of 1D protein structure annotations
machine-learning deep-learning proteins protein-structure protein-sequences hhblits secondary-structure psi-blast solvent-accessible-surface-area contact-density torsion-angles
- Updated
- C++
PSSpred (Protein Secondary Structure prediction) is a simple neural network training algorithm for accurate protein secondary structure prediction. It first collects multiple sequence alignments using PSI-BLAST. Amino-acid frequence and log-odds data with Henikoff weights are then used to train secondary structure, separately, based on the Rumel…
protein prediction-algorithm psi-blast nerual-network protein-secondary-structure acid-frequence henikoff-weights
- Updated
- Perl
- Updated
- Python
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