Analyze Sybase Data in R via ODBC

Access Sybase data with pure R script and standard SQL. You can use the CData ODBC Driver for Sybase and the RODBC package to work with remote Sybase data in R. By using the CData Driver, you are leveraging a driver written for industry-proven standards to access your data in the popular, open-source R language. This article shows how to use the driver to execute SQL queries to Sybase data and visualize Sybase data in R.

Install R

You can complement the driver's performance gains from multi-threading and managed code by running the multithreaded Microsoft R Open or by running R linked with the BLAS/LAPACK libraries. This article uses Microsoft R Open (MRO).

Connect to Sybase as an ODBC Data Source

Information for connecting to Sybase follows, along with different instructions for configuring a DSN in Windows and Linux environments.

To connect to Sybase, specify the following connection properties:

• Server: Set this to the name or network address of the Sybase database instance.
• Database: Set this to the name of the Sybase database running on the specified Server.

Optionally, you can also secure your connections with TLS/SSL by setting UseSSL to true.

Sybase supports several methods for authentication including Password and Kerberos.

Connect Using Password Authentication

Set the AuthScheme to Password and set the following connection properties to use Sybase authentication.

• User: Set this to the username of the authenticating Sybase user.
• Password: Set this to the username of the authenticating Sybase user.

Connect using LDAP Authentication

To connect with LDAP authentication, configure Sybase server-side to use the LDAP authentication mechanism.

After configuring Sybase for LDAP, you can connect using the same credentials as Password authentication.

Connect Using Kerberos Authentication

To leverage Kerberos authentication, begin by enabling it setting AuthScheme to Kerberos. See the Using Kerberos section in the Help documentation for more information on using Kerberos authentication.

You can find an example connection string below:

Server=MyServer;Port=MyPort;User=SampleUser;Password=SamplePassword;Database=MyDB;Kerberos=true;KerberosKDC=MyKDC;KerberosRealm=MYREALM.COM;KerberosSPN=server-name

When you configure the DSN, you may also want to set the Max Rows connection property. This will limit the number of rows returned, which is especially helpful for improving performance when designing reports and visualizations.

Windows

If you have not already, first specify connection properties in an ODBC DSN (data source name). This is the last step of the driver installation. You can use the Microsoft ODBC Data Source Administrator to create and configure ODBC DSNs.

Linux

If you are installing the CData ODBC Driver for Sybase in a Linux environment, the driver installation predefines a system DSN. You can modify the DSN by editing the system data sources file (/etc/odbc.ini) and defining the required connection properties.

/etc/odbc.ini

[CData Sybase Source]
Driver = CData ODBC Driver for Sybase
Description = My Description
User = myuser
Password = mypassword
Server = localhost
Database = mydatabase
Charset = iso_1

For specific information on using these configuration files, please refer to the help documentation (installed and found online).

Load the RODBC Package

To use the driver, download the RODBC package. In RStudio, click Tools -> Install Packages and enter RODBC in the Packages box.

After installing the RODBC package, the following line loads the package:

library(RODBC)

Note: This article uses RODBC version 1.3-12. Using Microsoft R Open, you can test with the same version, using the checkpoint capabilities of Microsoft's MRAN repository. The checkpoint command enables you to install packages from a snapshot of the CRAN repository, hosted on the MRAN repository. The snapshot taken Jan. 1, 2016 contains version 1.3-12.

library(checkpoint)
checkpoint("2016-01-01")

Connect to Sybase Data as an ODBC Data Source

You can connect to a DSN in R with the following line:

conn <- odbcConnect("CData Sybase Source")

Schema Discovery

The driver models Sybase APIs as relational tables, views, and stored procedures. Use the following line to retrieve the list of tables:

sqlTables(conn)

Execute SQL Queries

Use the sqlQuery function to execute any SQL query supported by the Sybase API.

products <- sqlQuery(conn, "SELECT Id, ProductName FROM Products WHERE ProductName = Konbu", believeNRows=FALSE, rows_at_time=1)

You can view the results in a data viewer window with the following command:

View(products)

Plot Sybase Data

You can now analyze Sybase data with any of the data visualization packages available in the CRAN repository. You can create simple bar plots with the built-in bar plot function:

par(las=2,ps=10,mar=c(5,15,4,2))
barplot(products$ProductName, main="Sybase Products", names.arg = products$Id, horiz=TRUE)

👁 A basic bar plot. (Salesforce is shown.)