rsHRF: A Toolbox for Resting State HRF Deconvolution and Connectivity Analysis (MATLAB)
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- MATLAB
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resting-state-fmri
Here are 31 public repositories matching this topic...
Repository for the Brainhack School 2020 team working with fMRI and ABIDE data to train machine learning models.
plotly cross-validation reproducible-science project-management autism fmri jupyter-notebooks nilearn scikitlearn-machine-learning leave-one-out-cross-validation abide-data kfold-cross-validation resting-state-fmri preparation-script cv-classifier brainhack-school support-vector-classification group-kfold-cross-validation
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- Jupyter Notebook
Easylearn is designed for machine learning mainly in resting-state fMRI, radiomics and other fields (such as EEG). Easylearn is built on top of scikit-learn, pytorch and other packages. Easylearn can assist doctors and researchers who have limited coding experience to easily realize machine learning, e.g., (MR/CT/PET/EEG)imaging-marker- or other…
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Graph saliency maps through spectral convolutional networks for brain mapping
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xDF estimates variance of Pearson's correlations among highly autocorrelated time series.
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A Python software package for BWAS
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System segregation (see Chan et al. 2014 PNAS) and RSFC brain network tools
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BIDS App for resting state signal extraction using nilearn.
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Sparsely Reconstructed Graphs (SpaRG) for robust and interpretable fMRI analysis using GNNs and VAEs.
deep-learning vae neuroimaging fmri brain-connectivity generalization resting-state-fmri fmri-roi-analysis sparsification gnn connectomes
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A Python software package for sKPCR
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Documentation and MATLAB code for test-retest functional MRI studies.
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👁 :octocat:
This repository contains the notes, matlab toolbox and implement document of the brant. Enjoy!
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Easy Resting State Analysis with Python
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Inter-Regional High-level Relation Learning from Functional Connectivity via Self-Supervision - PyTorch Implementation (MICCAI 2021)
deep-learning pytorch autoencoder neuroimage autism-spectrum-disorder resting-state-fmri self-supervised-learning
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PUMI: neuroimaging Pipelines Using Modular workflow Integration
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Seed-based resting-state functional connectivity with Nilearn.
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Resting-state Functional Correlation (RSFC) node set (Chan et al. 2014 PNAS)
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Scripts used in the "Spatiotemporal Structure of Spontaneous Brain Activity in Autistic Children" project.
fmri qpp autism-spectrum-disorder functional-connectivity resting-state resting-state-fmri quasi-periodic-patterns
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Scripts for the paper: A supervoxel-based method for groupwise whole brain parcellation with resting-state fMRI data.
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Analysis scripts used to analyze the local and global functional connectivity of the medial temporal lobe including the amygdala ('A-MTL') described in Ruiz-Rizzo et al. (2020), NeuroImage.
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- Shell
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