snvs
Here are 27 public repositories matching this topic...
Personal Cancer Genome Reporter (PCGR)
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- R
Microassembly based somatic variant caller for NGS data
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- C
SNV calling from single cell sequencing
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- HTML
ClairS - a deep-learning method for long-read somatic small variant calling
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- Python
A method for variant graph genotyping based on exact alignment of k-mers
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- C++
ClairS-TO - a deep-learning method for tumor-only somatic variant calling
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- Python
Generic human DNA variant annotation pipeline
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- Python
Detect and phase minor SNVs from long-read sequencing data
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- C++
Filters for Next Generation Sequencing
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- Python
A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expression using RNA-sequencing data.
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- Python
A collection of software to work with genomic variants
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- Python
This repository will house the scripts used to analyze and represent genomic and temperature data for my dissertation.
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- Shell
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