Python Polars: High-Performance DataFrame Library in Rust

5 min read

Introduction

Polars is a high-performance DataFrame library designed for speed and efficiency. It leverages all available cores on your machine, optimizes queries to minimize unnecessary operations, and manages datasets larger than your RAM. With a consistent API and strict schema adherence, Python Polars ensures predictability and reliability. Written in Rust, it offers C/C++ level performance, fully controlling critical parts of the query engine for optimal results.

Overview: 

• Learn about Polars, a high-performance DataFrame library in Rust.
• Discover Apache Arrow, which Polars leverages for fast data access and manipulation.
• Polars supports deferred, optimized operations and immediate results, offering flexible query execution.
• Uncover the streaming capabilities of Polars, especially its ability to handle large datasets in chunks.
• Understand Polars strict schemas to ensure data integrity and predictability, minimizing runtime errors.

Key Concepts of Polars

1. Apache Arrow Format: Polars uses Apache Arrow, an efficient columnar memory format, to enable fast data access and manipulation. This ensures high performance and seamless interoperability with other Arrow-based systems.
2. Lazy vs Eager Execution: It supports lazy execution, deferring operations for optimization, and eager execution, performing operations immediately. Lazy execution optimizes computations, while eager execution provides instant results.
3. Streaming: Polars can handle streaming data and processing large datasets in chunks. This reduces memory usage and is ideal for real-time data analysis.
4. Contexts: Polars contexts define the scope of data operations, providing structure and consistency in data processing workflows. The primary contexts are selection, filtering, and aggregation.
5. Expressions: Expressions in Polars represent data operations like arithmetic, aggregations, and filtering. They allow for the efficient building of complex data processing and its pipelines.
6. Strict Schema Adherence: It enforces a strict schema, requiring known data types before executing queries. This ensures data integrity and reduces runtime errors.

Also Read: Is Pypolars the New Alternative to Pandas?

Python Polars Expressions

Install Polars with ‘pip install polars.’

We can read the data and describe it like in Pandas

import polars as pl

df = pl.read_csv('iris.csv')

df.head() # this will display shape, datatypes of the columns and first 5 rows

df.describe() # this will display basic descriptive statistics of columns

Next up we can select different columns with basic operations.

df.select(pl.sum('sepal_length').alias('sum_sepal_length'),
 pl.mean('sepal_width').alias('mean_sepal_width'),
 pl.max('species').alias('max_species'))
 
# retuens a data frame with given column names and operations performed on them.

We can also select using polars.selectors

import polars.selectors as cs

df.select(cs.float()) # returns all columns with float data types

# we can also search with sub-strings or regex
df.select(cs.contains('width')) # returns the columns that have 'width' in the name.

Now we can use conditionals.

df.select(pl.col('sepal_width'),
 pl.when(pl.col("sepal_width") > 2)
 .then(pl.lit(True))
 .otherwise(pl.lit(False))
 .alias("conditional"))
 
# This returns an additional column with boolean values with true when sepal_width > 2

Patterns in the strings can be checked, extracted, or replaced.

df_1 = pl.DataFrame({"id": [1, 2], "text": ["123abc", "abc456"]})
df_1.with_columns(
 pl.col("text").str.replace(r"abc\b", "ABC"),
 pl.col("text").str.replace_all("a", "-", literal=True).alias("text_replace_all"),
)

# replace one match of abc at the end of a word (\b) with ABC and all occurrences of a with -

Filtering columns

df.filter(pl.col('species') == 'setosa',
 pl.col('sepal_width') > 2)
 
# returns data with only setosa species and where sepal_width > 2

Groupby in this high-performance dataframe library in Rust.

df.group_by('species').agg(pl.len(), 
 pl.mean('petal_width'),
 pl.sum('petal_length'))
 

The above returns the number of values by species and the mean of petal_width, the sum of petal_length by species.

Joins

In addition to typical inner, outer, and left joins, polars have ‘semi’ and ‘anti.’ Let’s look at the ‘semi’ join.

df_cars = pl.DataFrame(
 {
 "id": ["a", "b", "c"],
 "make": ["ford", "toyota", "bmw"],
 }
)
df_repairs = pl.DataFrame(
 {
 "id": ["c", "c"],
 "cost": [100, 200],
 }
)
# now an inner join produces with multiple rows for each car that has had multiple repair jobs


df_cars.join(df_repairs, on="id", how="semi")

# this produces a single row for each car that has had a repair job carried out

The ‘anti’ join produces a DataFrame showing all the cars from df_cars for which the ID is not present in the df_repairs DataFrame.

We can concat dataframes with simple syntax.

df_horizontal_concat = pl.concat(
 [
 df_h1,
 df_h2,
 ],
 how="horizontal",
) # this returns wider dataframe

df_horizontal_concat = pl.concat(
 [
 df_h1,
 df_h2,
 ],
 how="vertical",
) # this returns longer dataframe

Lazy API

The above examples show that the eager API executes the query immediately. The lazy API, on the other hand, evaluates the query after applying various optimizations, making the lazy API the preferred option.

Let’s look at an example.

q = (
 pl.scan_csv("iris.csv")
 .filter(pl.col("sepal_length") > 5)
 .group_by("species")
 .agg(pl.col("sepal_width").mean())
)

# how query graph without optimization - install graphviz
q.show_graph(optimized=False)

👁 Lazy API | Polars: High-Performance DataFrame Library in Rust

Read from bottom to top. Each box is one stage in the query plan. Sigma stands for SELECTION and indicates selection based on filter conditions. Pi stands for PROJECTION and indicates choosing a subset of columns.

Here, we choose all five columns, and no selections are made while reading the CSV file. Then, we filter by the column and aggregate one after another.

Now, look at the optimized query plan with q.show_graph(optimized=True)

👁 Lazy API | Polars

Here, we choose only 3 out of 5 columns, as subsequent queries are done on only them. Even in them, we select data based on the filter condition. We are not loading any other data. Now, we can aggregate the selected data. Thus, this method is much faster and requires less memory.

We can collect the results now. We can process the data in batches if the whole dataset doesn’t fit in the memory.

q.collect()

# to process in batches
q.collect(streaming=True)

Polars is growing in popularity, and many libraries like scikit-learn, seaborn, plotly, and others support Polars.

Conclusion

Polars offers a robust, high-performance DataFrame library for speed, efficiency, and scalability. With features like Apache Arrow integration, lazy and eager execution, streaming data processing, and strict schema adherence, Polars stands out as a versatile tool for data professionals. Its consistent API and use of Rust ensure optimal performance, making it an essential tool in modern data analysis workflows.

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